Function that retrieves variants in cancer predisposition genes linked to cancer-related conditions according to ClinVar — check_variant2cancer_phenotype • CPSR

Function that retrieves variants in cancer predisposition genes linked to cancer-related conditions according to ClinVar

Usage

check_variant2cancer_phenotype(cpg_calls, ref_data)

Arguments

cpg_calls: data frame with variants in predisposition_genes
ref_data: object with PCGR/CPSR reference data