Write oncoEnrichR report object to output file

Function that writes an oncoEnrichR report object to file, either as an interactive HTML report or as an Excel workbook.

Usage

write(
  report,
  oeDB,
  file = "testReport.html",
  ignore_file_extension = F,
  overwrite = F,
  format = "html",
  ...
)

report: object with oncoEnrichR report data (returned by oeDB$onco_enrich)
oeDB: oncoEnrichR data repository object - as returned from load_db()
file: full filename for report output (e.g. "oe_report.html" or "oe_report.xlsx")
ignore_file_extension: logical to accept any type of filaname extensions (for Galaxy integration)
overwrite: logical indicating if existing output files may be overwritten
format: file format of output (html/excel)
...: options for Galaxy/non self-contained HTML. Only applicable for use in Galaxy