Function that generates MSI prediction data for PCGR report

Function that generates MSI prediction data for PCGR report

Usage

generate_report_data_msi(sample_calls, pcgr_data, sample_name, pcgr_config)

Arguments

sample_calls

variant calls subject to mutational signature analysis

pcgr_data

object with PCGR annotation data

sample_name

sample identifier

pcgr_config

Object with PCGR configuration parameters