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Function that generates MSI prediction data for PCGR report

Source: R/msi.R
generate_report_data_msi.Rd

Function that generates MSI prediction data for PCGR report

Usage

generate_report_data_msi(variant_set, ref_data = NULL, settings = NULL)

Arguments

variant_set

variant calls subject to MSI classification

ref_data

PCGR reference data object

settings

PCGR run/configuration settings