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Function that tiered variant sets for SNVs/InDels

Source: R/mutational_burden.R
generate_report_data_tmb.Rd

Function that tiered variant sets for SNVs/InDels

Usage

generate_report_data_tmb(sample_calls, pcgr_data, sample_name, pcgr_config)

Arguments

sample_calls

variant calls subject to mutational signature analysis

pcgr_data

object with PCGR annotation data

sample_name

sample identifier

pcgr_config

Object with PCGR configuration parameters

Value

pcg_report_data data frame with all report elements