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Function that extracts oncogenic copy number events from a data frame of annotated transcripts (within copy number segments), utilizing oncogene/tumor suppressor status and copy number variant class (gain/loss). This set is used to highlight copy-altered transcripts that are presumably oncogenic, yet not actionable per se.

Usage

get_oncogenic_cna_events(cna_df_display = NULL)

Arguments

cna_df_display

data frame with transcript annotations per copy number segment