Build biomarker reactable with category-aware styling Combines tier 1 and tier 2 records in one table. Header uses tier 1 color; THERAPY_MATCH cell background reflects the row's tier (1 or 2).

Build biomarker reactable with category-aware styling Combines tier 1 and tier 2 records in one table. Header uses tier 1 color; THERAPY_MATCH cell background reflects the row's tier (1 or 2).

Usage

render_actble_bm_table(
  rctbl_recs = NULL,
  variant_category = "snv_indel",
  clnsig = "therapeutic_sensitivity",
  color_palette = pcgrr::color_palette
)

Arguments

rctbl_recs

List with $main and $nested data frames. $main must contain ACTIONABILITY_TIER with values 1 and 2.

variant_category

One of "snv_indel", "cnv", "fusion"

clnsig

One of "therapeutic_sensitivity" or "therapeutic_resistance",

Value

A reactable object with the biomarker table