Function that generate stats for a given variant set, considering number of variants/genes affected across tiers, types of variants () — variant_stats_report • PCGR

Function that generate stats for a given variant set, considering number of variants/genes affected across tiers, types of variants ()

Usage

variant_stats_report(callset = NULL, name = "vstats", vartype = "snv_indel")

Arguments

callset: list object with callset data (CNA or SNVs/InDels)
name: type of variant statistic
vartype: type of variant ('snv_indel', 'cna')